Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922555.1_cds_XP_016471306.1_63662
CDS Infomation

[gene=LOC107793458] [db_xref=GeneID:107793458] [protein=calcium-dependent protein kinase 13-like] [protein_id=XP_016471306.1] [location=join(3544..4174,5787..5930,6033..6185,6991..7106,7191..7358,8442..8672,8762..8911)] [gbkey=CDS]
Sequence

ATGGGGAATTGCTGCATATCTCCGGCAGCAGTAGCGACAGAAGACGTAAAATCATCAAAC
TACTCCGGCCACGATCACCGCCGGAAAGAAAACTCCGGCGCCGGAAAAAACCAAAAACCA
ATCACCGTACTAGCCGACGTAAAGAAATCGAATATCGAGGAAATATACTTAGTTGATAGA
GAATTAGGAAGAGGTGAATTCGGAATAACCTACCTCTGTACCGATCGTAACAGCAGTGAA
ATTTTGGCTTGCAAGTCGATTTCGAAGCGAAAACTTAGAACATCTGTTGATATAGAGGAT
GTAAGGCGAGAAGTGGCTATAATGAAGCATTTGCCGTTAGATTCCAGCATTGTGAGATTT
AAGGAAGCTTGTGAGGATGAGAATGCGGTGCATTTGGTTATGGAGTTGTGCGAAGGCGGC
GAGCTGTTTGATAGGATAGTGGCAAGGGGGCATTACACGGAGCGTGCTGCTGCGGCTGTC
ATGCGGACGGTTGTGGAAGTGGTGCAGCTTTGTCATAAGAATGGTGTGATTCATCGAGAC
TTGAAACCTGAGAACTTTTTGTTTGCTAATAAAAAGGAGAATTCGCCACTTAAGGCTATT
GATTTTGGTTTGTCCATATTCTTCCAGCCAGGTGAGAGGTTTTCTGAAATTGTTGGAAGC
CCTTATTATATGGCTCCGGAGGTGCTCAGGCGAAACTATGGACCAGAAATAGATATATGG
AGTGCAGGAGTCATTATGTATATTTTGTTATGTGGAGTTCCTCCCTTTTGGGCTGAATCT
GAACAAGGTGTTGCTCAGGCCATCTTACGTGGAGCAATAGATTTCAAGCGTGAACCCTGG
CCGAGTATTTCAGAGACTGCTACAAATCTTGTACAACAAATGTTGGAGCCAGATCCAAAG
CTTCGACTAACTGCTAAACAAGTACTTGAACATCCTTGGCTTCAAAATGCTAAGAAGGCT
CCTAATGTTCCTCTTGGAGATGTTGTCAAATCAAGACTTAAGCAGTTTTCAATGATGAAT
AGGTTTAAGAGGAAAGCTCTGAGGGTGATTGCTGATTTCTTGTCTAATGAAGAAGTTGAA
GACCTCAAAGAAATGTTTAGCAAGATAGATACTGATAATAACGGTATTGTTTCAGTTGAG
GAACTAAAAGCCGGGCTTCAAAAATTCAATTCACAGCTGGCAGAATCTGAAATACAGATG
CTTATTCAAGCAATTGATACCAACGGCAAGGGGACCCTGGACTATGGGGAATTTATTGCC
GTTTCTCTCCATCTTCAAAGGATGGCAAATGATGAACATTTGCACAAGGCTTTCTCCTAC
TTTGATAAGGATGGCAATGGATATATTGAACCACATGAGCTTCAAGATGCACTGATGGAG
GATGGGGCAAGTGACTGCACCAACATTGTGAATGACATTTTACAGGAGGTTGATACGGAC
AAGGATGGCTGCATTAGCTATGAAGAATTTGTAGCCATGATGAGAACTGGGACAGATTGG
AGAAAGGCTTCTCGACATTATTCAAGGGGGAGATTTAATAGTCTAAGTGTGAAGCTAATG
AAGGATGGGTCACTCAACTTGGGGAATGAGTAA

Peptide Sequence

PEP ID

XP_016471306.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 13-like [Nicotiana tabacum]
Sequence

MGNCCISPAAVATEDVKSSNYSGHDHRRKENSGAGKNQKPITVLADVKKSNIEEIYLVDR
ELGRGEFGITYLCTDRNSSEILACKSISKRKLRTSVDIEDVRREVAIMKHLPLDSSIVRF
KEACEDENAVHLVMELCEGGELFDRIVARGHYTERAAAAVMRTVVEVVQLCHKNGVIHRD
LKPENFLFANKKENSPLKAIDFGLSIFFQPGERFSEIVGSPYYMAPEVLRRNYGPEIDIW
SAGVIMYILLCGVPPFWAESEQGVAQAILRGAIDFKREPWPSISETATNLVQQMLEPDPK
LRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVE
DLKEMFSKIDTDNNGIVSVEELKAGLQKFNSQLAESEIQMLIQAIDTNGKGTLDYGEFIA
VSLHLQRMANDEHLHKAFSYFDKDGNGYIEPHELQDALMEDGASDCTNIVNDILQEVDTD
KDGCISYEEFVAMMRTGTDWRKASRHYSRGRFNSLSVKLMKDGSLNLGNE

Transcript Sequence

Gene sequence data has not been registered.